- It is an advanced computing concept where computing is made to appear everywhere and anywhere.
- Ubiquitous computing can occur using any device, in any location, and in any format. A user interacts with the computer, which can exist in many different forms -laptop, tablets, terminals, phones, etc.
- Move beyond desktop machine
- Ex: digital audio players, radio-frequency identification tags, PDAs, smartphones, GPS, and interactive whiteboards
- Present or noticeable in every part of a thing or place
- Information processing engaged in every day’s activities and objects
Friday, 27 May 2016
Ubiquitous/ Pervasive computing
Monday, 5 May 2014
Installing bedtools on centOS
1. Download bedtools from
https://github.com/arq5x/bedtools2/releases
2. Save it to a local folder (eg: softwares folder)
3. Untar it using below command
# tar xvzf bedtools-2.19.1.tar.gz
4. You can find all the bedtools function in bedtools-2.19.1/bin folder
5. You have to set the PATH environmental variable for bedtools so that OS can locate the bedtools program, even if it is not in the current directory
Setting PATH environmental variable for bedtools
1. Open /etc/profile.d
2. Create a document and name it as bedtools.sh
3. Add the below line in bedtools.sh
export PATH = $PATH:/softwares/bedtools-2.19.1/bin
4. Save it and close bedtools.sh
5. If you want to load the environment variables within bedtools.sh without having to restart the machine, you can use the source command as in
# source bedtools.sh
https://github.com/arq5x/bedtools2/releases
2. Save it to a local folder (eg: softwares folder)
3. Untar it using below command
# tar xvzf bedtools-2.19.1.tar.gz
4. You can find all the bedtools function in bedtools-2.19.1/bin folder
5. You have to set the PATH environmental variable for bedtools so that OS can locate the bedtools program, even if it is not in the current directory
Setting PATH environmental variable for bedtools
1. Open /etc/profile.d
2. Create a document and name it as bedtools.sh
3. Add the below line in bedtools.sh
export PATH = $PATH:/softwares/bedtools-2.19.1/bin
4. Save it and close bedtools.sh
5. If you want to load the environment variables within bedtools.sh without having to restart the machine, you can use the source command as in
# source bedtools.sh
Install SRA toolkit on CentOS
1. Download SRA toolkit from
http://eutils.ncbi.nih.gov/Traces/sra/?view=software
2. For centos 64 bit, we have to download sratoolkit.2.3.5-2-centos_linux64.tar.gz
3. Save it to a local folder (eg: softwares folder)
4. Untar it using below command
# tar xvzf sratoolkit.2.3.5-2-centos_linux64.tar.gz
5. You can find all the toolkit functions in the sratoolkit.2.3.5-2-centos_linux64/bin folder
6. You have to set the PATH environmental variable for toolkit so that OS can locate the fastq-dump program, even if it is not in the current directory
Setting PATH environmental variable for SRA Toolkit
1. Open /etc/profile.d
2. Create a document and name it as fastq-dump.sh
3. Add the below line in fastq-dump.sh
export PATH = $PATH:/softwares/sratoolkit.2.3.5-2-centos_linux64/bin
4. Save it and close fastq-dump.sh
5. If you want to load the environment variables within fastq-dump.sh without having to restart the machine, you can use the source command as in
# source fastq-dump.sh
http://eutils.ncbi.nih.gov/Traces/sra/?view=software
2. For centos 64 bit, we have to download sratoolkit.2.3.5-2-centos_linux64.tar.gz
3. Save it to a local folder (eg: softwares folder)
4. Untar it using below command
# tar xvzf sratoolkit.2.3.5-2-centos_linux64.tar.gz
5. You can find all the toolkit functions in the sratoolkit.2.3.5-2-centos_linux64/bin folder
6. You have to set the PATH environmental variable for toolkit so that OS can locate the fastq-dump program, even if it is not in the current directory
Setting PATH environmental variable for SRA Toolkit
1. Open /etc/profile.d
2. Create a document and name it as fastq-dump.sh
3. Add the below line in fastq-dump.sh
export PATH = $PATH:/softwares/sratoolkit.2.3.5-2-centos_linux64/bin
4. Save it and close fastq-dump.sh
5. If you want to load the environment variables within fastq-dump.sh without having to restart the machine, you can use the source command as in
# source fastq-dump.sh
Thursday, 24 April 2014
Add image/logo in browser tab for website
How to add image/logo in browser tab for website?
<link rel="shortcut icon" href="path to your logo">
Monday, 24 February 2014
Installing xampp 1.8.3 on cent os 6.4
1. Download Xampp 1.8.3 for linux
2. Copy "xampp-linux-x64-1.8.3-3-installer.run" into Computer/Filesystem/opt folder
3. Open terminal from opt folder
4. Type below commands
[root@localhost opt]# chmod +x xampp-linux-x64-1.8.3-3-installer.run
[root@localhost opt]# ./xampp-linux-x64-1.8.3-3-installer.run
5. Window installation wizard will appear
6. Complete the installation process
2. Copy "xampp-linux-x64-1.8.3-3-installer.run" into Computer/Filesystem/opt folder
3. Open terminal from opt folder
4. Type below commands
[root@localhost opt]# chmod +x xampp-linux-x64-1.8.3-3-installer.run
[root@localhost opt]# ./xampp-linux-x64-1.8.3-3-installer.run
5. Window installation wizard will appear
6. Complete the installation process
Friday, 21 February 2014
Fatal server error: Cannot establish any listening sockets - Make sure an X server isn't already running
Issue
I have
installed vncserver and when I tried to start it but I get the error below
"WARNING:
The first attempt to start Xvnc failed, possibly because the font catalog is
not properly configured. Attempting to determine an appropriate font path for
this system and restart Xvnc using that font path ... Could not start Xvnc.
_XSERVTransSocketUNIXCreateListener:
...SocketCreateListener() failed _XSERVTransMakeAllCOTSServerListeners: server
already running Warning: Xalloc: requesting unpleasantly large amount of
memory: 0 bytes.
Fatal
server error: Cannot establish any listening sockets - Make sure an X server
isn't already running _XSERVTransSocketUNIXCreateListener:
...SocketCreateListener() failed _XSERVTransMakeAllCOTSServerListeners: server
already running Warning: Xalloc: requesting unpleasantly large amount of
memory: 0 bytes.
Fatal
server error: Cannot establish any listening sockets - Make sure an X server
isn't already running"
Solution
Terminate all VNCs processes. You can find the process number
by running the following command:
#ps -e | grep vnc
11028 ? 00:00:00 Xvnc
kill the process using
#skill -p <pid>
#skill -p 11028
Reinstall vncserver
Tiger VNC on Centos 6.3 fails, font catalog not properly configured
Issue
Whe I try to set up Tiger VNC server on CentOS 6.3 but I'm
getting the following error message when I run the command vncserver:
WARNING: The first attempt to start Xvnc failed, possibly
because the font catalog is not properly configured. Attempting to determine an
appropriate font path for this system and restart Xvnc using that font path ...
Could not start Xvnc.
/usr/bin/Xvnc: symbol lookup error: /usr/bin/Xvnc: undefined
symbol: pixman_composite_trapezoids
/usr/bin/Xvnc: symbol lookup error: /usr/bin/Xvnc: undefined
symbol: pixman_composite_trapezoids
Solution
To resolve the above issue, run the below command in
terminal
#yum install pixman pixman-devel libXfont
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